DIY Bio Software Information & Resources

1. Systems Biology Workbench

an open source framework connecting heterogeneous software applications

http://www.sys-bio.org/

2. TINKERCELL

Excellent CAD software for reprogramming cells. Free download, tutorials and demos.

http://www.tinkercell.com

3. Clotho

A Platform-based Design Tool for Synthetic Biological Systems

http://chess.eecs.berkeley.edu/clotho/

4. Biopython Tutorial and Cookbook

Freely available Python (http://www.python.org) tools for computational molecular biology.

http://biopython.org/DIST/docs/tutorial/Tutorial.html

5. NCBI Genome Workbench

An integrated application for viewing and analyzing sequence data in publically available sequence databases at NCBI

http://www.ncbi.nlm.nih.gov/projects/gbench/

6. Ageing Research Computational Tools (ARCT)

A repository of modules written for the construction and data-mining of the databases and projects in the Human Ageing Genomic Resources

http://genomics.senescence.info/software/perl.html

7. NanoEngineer-1

A molecular modeling system Ready to use programs for Windows and Mac. Intuitive, easy-to-use graphical user interface.

http://www.nanoengineer-1.net/mediawiki/index.php?title=Main_Page

8. Scriptlance

Outsource all your programming needs.

http://www.scriptlance.com/?ref=elad07

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